feat: mv data folder to root

backend/app/api/llm.py

@@ -6,12 +6,13 @@ from fastapi.security import HTTPAuthorizationCredentials, HTTPBearer
 from jose import jwt, JWTError
 from pydantic import BaseModel, Field
 from app.core.security import SECRET_KEY, ALGORITHM
+from app.core.data_root import get_data_root
 from litellm import completion
 
 router = APIRouter()
 security = HTTPBearer()
 
-DATA_FILE = os.path.join(os.path.dirname(os.path.dirname(os.path.dirname(__file__))), "data", "llm_config.json")
+DATA_FILE = str(get_data_root() / "llm_config.json")
 
 
 class CurrentUser(BaseModel):

backend/app/api/skills.py

@@ -10,14 +10,15 @@ from datetime import datetime
 from fastapi import APIRouter, HTTPException, UploadFile, File, Form
 from pydantic import BaseModel, Field
 
+from app.core.data_root import get_data_root, get_workspace_root
+
 router = APIRouter()
 
-BASE_DIR = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
-DATA_FILE = os.path.join(BASE_DIR, "data", "skills.json")
-SKILL_HUB_DIR = os.path.join(BASE_DIR, "data", "workspace", "skills")
+DATA_FILE = str(get_data_root() / "skills.json")
+SKILL_HUB_DIR = str(get_workspace_root() / "skills")
 
-# Ensure skill-hub directory exists
-os.makedirs(SKILL_HUB_DIR, exist_ok=True)
+def _ensure_skill_hub_dir() -> None:
+    os.makedirs(SKILL_HUB_DIR, exist_ok=True)
 
 class Skill(BaseModel):
     id: str = Field(..., description="Unique identifier for the skill")
@@ -134,6 +135,7 @@ def _write_skill_markdown(skill_dir: str, skill_name: str, description: Optional
     return skill_md_path
 
 def load_skills(project_id: Optional[int] = None) -> List[Dict[str, Any]]:
+    _ensure_skill_hub_dir()
     data = _load_data()
     
     registered_paths = set()
@@ -208,6 +210,7 @@ async def upload_skill(
     """Upload a skill file (SKILL.md) or a packaged skill (zip/tar.gz)."""
     filename = file.filename
     print(f"Uploading skill: {filename}, project_id: {project_id}")
+    _ensure_skill_hub_dir()
     
     # Create a unique temp directory
     temp_dir_name = f"temp_{datetime.now().timestamp()}_{os.urandom(4).hex()}"
@@ -323,6 +326,7 @@ async def upload_skill(
 
 @router.post("/skills", response_model=Skill)
 def create_skill(skill: SkillCreate):
+    _ensure_skill_hub_dir()
     data = load_skills()
     if any(item["id"] == skill.id for item in data):
         raise HTTPException(status_code=400, detail="Skill with this ID already exists")

backend/app/api/upload.py

@@ -3,14 +3,15 @@ import pandas as pd
 import duckdb
 import io
 import uuid
-from pathlib import Path
+
+from app.core.data_root import get_uploads_root
 
 router = APIRouter()
-upload_dir = Path(__file__).resolve().parents[2] / "data" / "uploads"
-upload_dir.mkdir(parents=True, exist_ok=True)
+upload_dir = get_uploads_root()
 
 @router.post("/upload/file")
 async def upload_file(file: UploadFile = File(...)):
+    upload_dir.mkdir(parents=True, exist_ok=True)
     allowed_extensions = ('.csv', '.xls', '.xlsx', '.parquet', '.db', '.sqlite', '.sqlite3')
     filename_lower = file.filename.lower()
     if not filename_lower.endswith(allowed_extensions):

backend/app/core/artifacts.py

@@ -6,6 +6,7 @@ from urllib.parse import quote
 
 from pydantic import BaseModel
 
+from app.core.data_root import get_data_root, get_reports_root, get_uploads_root, get_workspace_root
 
 LOCAL_URI_PATTERN = re.compile(r"local://[^\s<>'\"\]\)\}]+")
 PATH_PATTERN = re.compile(
@@ -138,11 +139,11 @@ def _normalize_locator(raw_locator: str) -> str:
 
 
 def _resolve_locator(locator: str) -> Path | None:
-    backend_root = Path(__file__).resolve().parents[2]
-    data_root = backend_root / "data"
-    workspace_root = data_root / "workspace"
-    uploads_root = data_root / "uploads"
-    reports_root = data_root / "data"
+    data_root = get_data_root()
+    workspace_root = get_workspace_root()
+    uploads_root = get_uploads_root()
+    reports_root = get_reports_root()
+    repo_root = data_root.parent
     if locator.startswith("local://"):
         raw_local = locator.replace("local://", "", 1).strip().lstrip("/\\")
         if not raw_local:
@@ -160,11 +161,11 @@ def _resolve_locator(locator: str) -> Path | None:
     if path.is_absolute():
         return path
     if normalized.startswith("data/data/"):
-        return backend_root / normalized
+        return repo_root / normalized
     checks = [
         workspace_root / normalized,
         data_root / normalized,
-        backend_root / normalized,
+        repo_root / normalized,
     ]
     for candidate in checks:
         if candidate.exists():

backend/app/core/data_root.py

@@ -0,0 +1,39 @@
+import os
+from pathlib import Path
+
+
+BACKEND_ROOT = Path(__file__).resolve().parents[2]
+REPO_ROOT = BACKEND_ROOT.parent
+DEFAULT_DATA_ROOT = REPO_ROOT / "data"
+LEGACY_DATA_ROOT = BACKEND_ROOT / "data"
+
+
+def get_data_root() -> Path:
+    configured = (os.getenv("DATA_ROOT") or "").strip()
+    if configured:
+        return Path(configured).expanduser().resolve()
+    if DEFAULT_DATA_ROOT.exists():
+        return DEFAULT_DATA_ROOT
+    if LEGACY_DATA_ROOT.exists():
+        print(f"[DATA_ROOT] legacy path detected: {LEGACY_DATA_ROOT}. Please migrate to {DEFAULT_DATA_ROOT}.")
+        return LEGACY_DATA_ROOT
+    return DEFAULT_DATA_ROOT
+
+
+def get_workspace_root() -> Path:
+    return get_data_root() / "workspace"
+
+
+def get_uploads_root() -> Path:
+    return get_data_root() / "uploads"
+
+
+def get_reports_root() -> Path:
+    return get_data_root() / "data"
+
+
+def ensure_data_layout() -> None:
+    get_data_root().mkdir(parents=True, exist_ok=True)
+    get_workspace_root().mkdir(parents=True, exist_ok=True)
+    get_uploads_root().mkdir(parents=True, exist_ok=True)
+    get_reports_root().mkdir(parents=True, exist_ok=True)

backend/app/core/files.py

@@ -2,12 +2,13 @@ import os
 from pathlib import Path
 from typing import Optional
 
+from app.core.data_root import get_data_root, get_reports_root, get_uploads_root, get_workspace_root
 
-backend_root = Path(__file__).resolve().parents[2]
-data_root = backend_root / "data"
-workspace_root = data_root / "workspace"
-uploads_root = data_root / "uploads"
-reports_root = data_root / "data"
+
+data_root = get_data_root()
+workspace_root = get_workspace_root()
+uploads_root = get_uploads_root()
+reports_root = get_reports_root()
 allowed_artifact_roots = (workspace_root, uploads_root, reports_root)
 
 
@@ -50,7 +51,7 @@ def resolve_artifact_target(target: str) -> Path | None:
     if path.is_absolute():
         return path
     if normalized.startswith("data/data/"):
-        return backend_root / normalized
+        return data_root.parent / normalized
     checks = (
         workspace_root / normalized,
         data_root / normalized,

backend/app/core/nanobot.py

@@ -34,6 +34,7 @@ from nanobot.config.schema import Config
 from app.api.skills import load_skills
 from app.services.llm_cache import get_llm_configs
 
+from app.core.data_root import get_workspace_root
 from app.core.streaming_provider import StreamingLiteLLMProvider
 
 class NanobotIntegration:
@@ -47,8 +48,7 @@ class NanobotIntegration:
         self._model_agent_lock = asyncio.Lock()
 
     def initialize(self):
-        # Set workspace path to backend/data/workspace
-        workspace_path = Path(os.path.join(os.path.dirname(os.path.dirname(os.path.dirname(__file__))), "data", "workspace"))
+        workspace_path = get_workspace_root()
         workspace_path.mkdir(parents=True, exist_ok=True)
         self._sync_builtin_skills_to_workspace(workspace_path)
         

backend/app/core/session_alias_store.py

@@ -5,14 +5,21 @@ from datetime import datetime, timezone
 from pathlib import Path
 from typing import Any
 
+from app.core.data_root import get_data_root
+
 
 class SessionAliasStore:
     def __init__(self) -> None:
-        backend_root = Path(__file__).resolve().parents[2]
-        data_dir = backend_root / "data"
-        data_dir.mkdir(parents=True, exist_ok=True)
+        data_dir = get_data_root()
+        try:
+            data_dir.mkdir(parents=True, exist_ok=True)
+        except PermissionError as exc:
+            raise RuntimeError(f"DATA_ROOT 权限不足: {data_dir}") from exc
         self.db_path = data_dir / "nanobot_sessions.db"
-        self._init_db()
+        try:
+            self._init_db()
+        except PermissionError as exc:
+            raise RuntimeError(f"DATA_ROOT 权限不足: {data_dir}") from exc
 
     def _connect(self) -> sqlite3.Connection:
         conn = sqlite3.connect(str(self.db_path))

backend/app/services/mdl.py

@@ -6,9 +6,9 @@ from app.models.datasource import DataSource
 from app.schemas.mdl import MDLManifest, Model, Column, TableReference
 from app.connectors.factory import get_connector
 from app.database import SessionLocal
+from app.core.data_root import get_data_root
 
-# Assuming running from backend/ directory
-MDL_STORAGE_PATH = Path("data/mdl")
+MDL_STORAGE_PATH = get_data_root() / "mdl"
 
 class MDLService:
     @staticmethod